Dr. Yip is professor and director of the Center for Data Science and Artificial Intelligence at Sanford Burnham Prebys Medical Discovery Institute. A leader in computational biology and bioinformatics at Chinese University of Hong Kong, he was recruited in 2022 to further elevate and accelerate Sanford Burnham Prebys’ growing capabilities and ambitions in next-generation biomedical research tools and approaches.
For almost 20 years, Dr. Yip’s research has focused on three primary interests: development of computational methods for analyzing data produced by emerging experimental technologies, such as single-cell and spatial transcriptomics; studying fundamental gene regulatory mechanisms using machine learning and data science methods; and identifying, annotating and interpreting genomic, transcriptomic and epigenomic changes in human diseases, such as cancers, diabetes, and neurodegenerative diseases.
Under his leadership, the mission of the Center for Data Science and Artificial Intelligence is to effectively tap the almost unlimited potential of rapidly evolving large-scale data sets and computational tools in biomedical research, with an emphasis on interdisciplinary collaborations that leverage the expertise of many disciplines to reveal new actionable knowledge.
Education and Training
2010: Postdoctoral associate, Molecular Biophysics and Biochemistry, Yale University
2009: PhD, Computer Science, Yale University
2003: M.Phil., Computer Science, The University of Hong Kong
1999: B.Eng., Computer Engineering, The University of Hong Kong
        Related Disease
        
        Biliary Atresia, Cancer, Diabetes – General, Hirschsprung Disease, Liver Cancer, Nasopharyngeal Carcinoma, Type 2 Diabetes      
        Phenomena or Processes
        
        Cancer Epigenetics, Gene Regulation, Oncogenes, Posttranslational Modification, Transcriptional Regulation, Tumor Microenvironment      
        Anatomical Systems and Sites
        
        Endocrine System, General Cell Biology, Immune System and Inflammation, Liver      
        Research Models
        
        Computational Modeling      
        Techniques and Technologies
        
        Bioinformatics, Comparative Genomics, Genomics, Machine Learning, Protein-Protein Interactions, Systems Biology      
The Yip lab studies gene regulatory mechanisms by means of computational modeling. To facilitate their data-centric approach, they develop novel methods for analyzing large amounts of biological data, including those produced by cutting-edge high-throughput experiments. Their computational models provide a systematic way to investigate the functional effects of different types of perturbations to regulatory mechanisms, which creates testable hypotheses for studying human diseases and facilitates translational research.
 Jul 11, 2025 Jul 11, 2025- Cutting to the core of how 3D structure shapes gene activityJul 11, 2025- New method can measure how secluded genomic regions are in 3D space and then link 3D position to gene activity. 
 Aug 27, 2024 Aug 27, 2024- Simulating science or science fiction?Aug 27, 2024- In the Conrad Prebys Center for Chemical Genomics, simulation-based techniques help scientists find new potential treatments. 
 Aug 13, 2024 Aug 13, 2024- Dodging AI and other computational biology dangersAug 13, 2024- Sanford Burnham Prebys scientists say that understanding the potential pitfalls of using artificial intelligence and computational biology techniques in biomedical… 
 Aug 8, 2024 Aug 8, 2024- Scripting their own futuresAug 8, 2024- At Sanford Burnham Prebys Graduate School of Biomedical Sciences, students embrace computational methods to enhance their research careers 
 May 11, 2023 May 11, 2023- New algorithm can predict diabetic kidney diseaseMay 11, 2023- Researchers from Sanford Burnham Prebys and the Chinese University of Hong Kong have developed a computational approach to predict whether… 
 Feb 9, 2022 Feb 9, 2022- Bioinformaticist Kevin Yip joins Sanford Burnham PrebysFeb 9, 2022- Bioinformaticist Kevin Yip, PhD, has joined Sanford Burnham Prebys as a professor, where he will collaborate with other faculty across the 


